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1 - 10 of 26 results for: BIOE ; Currently searching autumn courses. You can expand your search to include all quarters

BIOE 44: Fundamentals for Engineering Biology Lab

Introduction to next-generation techniques in genetic, molecular, biochemical, and cellular engineering. Lab modules build upon current research including: gene and genome engineering via decoupled design and construction of genetic material; component engineering focusing on molecular design and quantitative analysis of experiments; device and system engineering using abstracted genetically encoded objects; and product development based on useful applications of biological technologies. Concurrent or previous enrollment in BIO 82 or BIO 83.
Terms: Aut, Spr | Units: 4 | UG Reqs: WAY-SMA | Grading: Letter (ABCD/NP)

BIOE 101: Systems Biology (BIOE 210)

Complex biological behaviors through the integration of computational modeling and molecular biology. Topics: reconstructing biological networks from high-throughput data and knowledge bases. Network properties. Computational modeling of network behaviors at the small and large scale. Using model predictions to guide an experimental program. Robustness, noise, and cellular variation. Prerequisites: CME 102; BIO 82, BIO 84; or consent of instructor.
Terms: Aut | Units: 3 | UG Reqs: WAY-AQR | Grading: Letter (ABCD/NP)

BIOE 141A: Senior Capstone Design I

Lecture/Lab. First course of two-quarter capstone sequence. Team based project introduces students to the process of designing new biological technologies to address societal needs. Topics include methods for validating societal needs, brainstorming, concept selection, and the engineering design process. First quarter deliverable is a design for the top concept. Second quarter involves implementation and testing. Guest lectures and practical demonstrations are incorporated. Prerequisites: BIOE 123 and BIOE 44. This course is open only to seniors in the undergraduate Bioengineering program.
Terms: Aut | Units: 4 | Grading: Letter (ABCD/NP)

BIOE 150: Biochemical Engineering (CHEMENG 150)

Systems-level combination of chemical engineering concepts with biological principles. The production of protein pharmaceuticals as a paradigm to explore quantitative biochemistry and cellular physiology, the elemental stoichiometry of metabolism, recombinant DNA technology, synthetic biology and metabolic engineering, fermentation development and control, product isolation and purification, protein folding and formulation, and biobusiness and regulatory issues. Prerequisite: CHEMENG 181 (formerly 188) or BIOSCI 41 or equivalent.
Terms: Aut | Units: 3 | Grading: Letter (ABCD/NP)

BIOE 191: Bioengineering Problems and Experimental Investigation

Directed study and research for undergraduates on a subject of mutual interest to student and instructor. Prerequisites: consent of instructor and adviser. (Staff)
Terms: Aut, Win, Spr, Sum | Units: 1-5 | Repeatable for credit | Grading: Letter or Credit/No Credit

BIOE 191X: Out-of-Department Advanced Research Laboratory in Bioengineering

Terms: Aut, Win, Spr, Sum | Units: 1-15 | Repeatable for credit | Grading: Letter (ABCD/NP)

BIOE 196: INTERACTIVE MEDIA AND GAMES (BIOPHYS 196, CS 544)

Interactive media and games increasingly pervade and shape our society. In addition to their dominant roles in entertainment, video games play growing roles in education, arts, and science. This seminar series brings together a diverse set of experts to provide interdisciplinary perspectives on these media regarding their history, technologies, scholarly research, industry, artistic value, and potential future.
Terms: Aut | Units: 1 | Repeatable for credit | Grading: Satisfactory/No Credit

BIOE 210: Systems Biology (BIOE 101)

Complex biological behaviors through the integration of computational modeling and molecular biology. Topics: reconstructing biological networks from high-throughput data and knowledge bases. Network properties. Computational modeling of network behaviors at the small and large scale. Using model predictions to guide an experimental program. Robustness, noise, and cellular variation. Prerequisites: CME 102; BIO 82, BIO 84; or consent of instructor.
Terms: Aut | Units: 3 | Grading: Letter (ABCD/NP)

BIOE 214: Representations and Algorithms for Computational Molecular Biology (BIOMEDIN 214, CS 274, GENE 214)

Topics: introduction to bioinformatics and computational biology, algorithms for alignment of biological sequences and structures, computing with strings, phylogenetic tree construction, hidden Markov models, basic structural computations on proteins, protein structure prediction, protein threading techniques, homology modeling, molecular dynamics and energy minimization, statistical analysis of 3D biological data, integration of data sources, knowledge representation and controlled terminologies for molecular biology, microarray analysis, machine learning (clustering and classification), and natural language text processing. Prerequisite: CS 106B; recommended: CS161; consent of instructor for 3 units.
Terms: Aut | Units: 3-4 | Grading: Medical Option (Med-Ltr-CR/NC)

BIOE 222: Physics and Engineering Principles of Multi-modality Molecular Imaging of Living Subjects (RAD 222)

Physics and Engineering Principles of Multi-modality Molecular Imaging of Living Subjects ( RAD 222A)nFocuses on instruments, algorithms and other technologies for non-invasive imaging of molecular processes in living subjects. Introduces research and clinical molecular imaging modalities, including PET, SPECT, MRI, Ultrasound, Optics, and Photoacoustics. For each modality, lectures cover the basics of the origin and properties of imaging signal generation, instrumentation physics and engineering of signal detection, signal processing, image reconstruction, image data quantification, applications of machine learning, and applications of molecular imaging in medicine and biology research.
Terms: Aut | Units: 3-4 | Grading: Medical Option (Med-Ltr-CR/NC)
Instructors: Levin, C. (PI)
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