BIOC 158:
Genomics, Bioinformatics and Medicine (BIOC 258, BIOMEDIN 258, HUMBIO 158G)
Molecular basis of inherited human disease. Diagnostics approaches: simple Mendelian diseases and complex, multifactorial diseases. Genomics: functional genomics, epigenetics, gene expression, SNPs, copy number and other structural genomic variations involved in disease. Novel therapeutic methods: stem cell therapy, gene therapy and drug developments that depend on the knowledge of genomics. Personal genomics, pharmacogenomics, clinical genomics and their role in the future of preventive medicine. Prerequisites: BIO 41 or HUMBIO 2A or consent of instructor. Those with credit in BIOC 118 not eligible to enroll. Course webpage: http://biochem158.stanford.edu/
Terms: Aut, Win, Spr

Units: 3

UG Reqs: GER: DBNatSci, WAYSMA

Repeatable for credit

Grading: Medical Option (MedLtrCR/NC)
BIOC 199:
Undergraduate Research
Students undertake investigations sponsored by individual faculty members. Prerequisite: consent of instructor.
Terms: Aut, Win, Spr, Sum

Units: 118

Repeatable for credit

Grading: Letter or Credit/No Credit
Instructors: ;
Artandi, S. (PI);
Beachy, P. (PI);
Brandman, O. (PI);
Brown, P. (PI);
Brutlag, D. (PI);
Chen, J. (PI);
Chu, G. (PI);
Das, R. (PI);
Davis, R. (PI);
Harbury, P. (PI);
Herschlag, D. (PI);
Kim, P. (PI);
Krasnow, M. (PI);
Pfeffer, S. (PI);
Rohatgi, R. (PI);
Salzman, J. (PI);
Spudich, J. (PI);
Straight, A. (PI);
Theriot, J. (PI);
Yeh, E. (PI);
Habebo, T. (GP);
Mesa, J. (GP);
Thompson, J. (GP)
BIOC 221:
The Teaching of Biochemistry
Required for teaching assistants in Biochemistry. Practical experience in teaching on a onetoone basis, and problem set design and analysis. Familiarization with current lecture and text materials; evaluations of class papers and examinations. Prerequisite: enrollment in the Biochemistry Ph.D. program or consent of instructor.
Terms: Aut, Win, Spr, Sum

Units: 3

Repeatable for credit

Grading: Medical Satisfactory/No Credit
Instructors: ;
Artandi, S. (PI);
Beachy, P. (PI);
Brandman, O. (PI);
Brown, P. (PI);
Brutlag, D. (PI);
Chen, J. (PI);
Chu, G. (PI);
Das, R. (PI);
Davis, R. (PI);
Harbury, P. (PI);
Herschlag, D. (PI);
Kim, P. (PI);
Krasnow, M. (PI);
Pfeffer, S. (PI);
Rohatgi, R. (PI);
Salzman, J. (PI);
Spudich, J. (PI);
Straight, A. (PI);
Theriot, J. (PI);
Yeh, E. (PI);
Habebo, T. (GP);
Mesa, J. (GP);
Thompson, J. (GP)
BIOC 241:
Biological Macromolecules (BIOPHYS 241, GENE 241, SBIO 241)
The physical and chemical basis of macromolecular function. Topics include: forces that stabilize macromolecular structure and their complexes; thermodynamics and statistical mechanics of macromolecular folding, binding, and allostery; diffusional processes; kinetics of enzymatic processes; the relationship of these principles to practical application in experimental design and interpretation. The class emphasizes interactive learning, and is divided equally among lectures, inclass group problem solving, and discussion of current and classical literature. Enrollment limited to 50. Prerequisites: Background in biochemistry and physical chemistry recommended but material available for those with deficiency in these areas; undergraduates with consent of instructor only.
Terms: Spr

Units: 35

Grading: Medical Option (MedLtrCR/NC)
BIOC 258:
Genomics, Bioinformatics and Medicine (BIOC 158, BIOMEDIN 258, HUMBIO 158G)
Molecular basis of inherited human disease. Diagnostics approaches: simple Mendelian diseases and complex, multifactorial diseases. Genomics: functional genomics, epigenetics, gene expression, SNPs, copy number and other structural genomic variations involved in disease. Novel therapeutic methods: stem cell therapy, gene therapy and drug developments that depend on the knowledge of genomics. Personal genomics, pharmacogenomics, clinical genomics and their role in the future of preventive medicine. Prerequisites: BIO 41 or HUMBIO 2A or consent of instructor. Those with credit in BIOC 118 not eligible to enroll. Course webpage: http://biochem158.stanford.edu/
Terms: Aut, Win, Spr

Units: 3

Repeatable for credit

Grading: Medical Option (MedLtrCR/NC)
BIOC 299:
Directed Reading in Biochemistry
Prerequisite: consent of instructor.
Terms: Aut, Win, Spr, Sum

Units: 118

Repeatable for credit

Grading: Medical Satisfactory/No Credit
Instructors: ;
Artandi, S. (PI);
Beachy, P. (PI);
Brandman, O. (PI);
Brown, P. (PI);
Brutlag, D. (PI);
Chen, J. (PI);
Chu, G. (PI);
Das, R. (PI);
Davis, R. (PI);
Harbury, P. (PI);
Herschlag, D. (PI);
Kim, P. (PI);
Krasnow, M. (PI);
Pfeffer, S. (PI);
Rohatgi, R. (PI);
Salzman, J. (PI);
Spudich, J. (PI);
Straight, A. (PI);
Theriot, J. (PI);
Yeh, E. (PI);
Habebo, T. (GP);
Mesa, J. (GP);
Thompson, J. (GP)
BIOC 360:
Developing an Original Research Proposal
Biochemistry 3rd year PhD students with permission of instructor only. Students foster broad familiarity with the biomedical literature and learn to develop new research directions. Topics well outside of each student's research topic are chosen for regular informal journal club presentations. Students work with faculty to hone skills for identifying important open scientific questions, formulating hypotheses, and refining experimental logic. Students work collectively to create a "model" research proposal on a topic of general interest to the group, and then individually to develop an original proposal on a topic of each student's choice.
Terms: Aut, Win, Spr, Sum

Units: 1

Repeatable for credit

Grading: Satisfactory/No Credit
BIOC 370:
Medical Scholars Research
Provides an opportunity for student and faculty interaction, as well as academic credit and financial support, to medical students who undertake original research. Enrollment is limited to students with approved projects.
Terms: Aut, Win, Spr, Sum

Units: 418

Repeatable for credit

Grading: Medical School MD Grades
Instructors: ;
Artandi, S. (PI);
Beachy, P. (PI);
Brandman, O. (PI);
Brown, P. (PI);
Brutlag, D. (PI);
Chen, J. (PI);
Chu, G. (PI);
Das, R. (PI);
Davis, R. (PI);
Harbury, P. (PI);
Herschlag, D. (PI);
Kim, P. (PI);
Krasnow, M. (PI);
Pfeffer, S. (PI);
Rohatgi, R. (PI);
Salzman, J. (PI);
Spudich, J. (PI);
Straight, A. (PI);
Theriot, J. (PI);
Yeh, E. (PI);
Habebo, T. (GP);
Mesa, J. (GP);
Thompson, J. (GP)
BIOC 399:
Graduate Research and Special Advanced Work
Allows for qualified students to undertake investigations sponsored by individual faculty members.
Terms: Aut, Win, Spr, Sum

Units: 118

Repeatable for credit

Grading: Medical Satisfactory/No Credit
Instructors: ;
Artandi, S. (PI);
Beachy, P. (PI);
Brandman, O. (PI);
Brown, P. (PI);
Brutlag, D. (PI);
Chen, J. (PI);
Chu, G. (PI);
Das, R. (PI);
Davis, R. (PI);
Harbury, P. (PI);
Herschlag, D. (PI);
Kim, P. (PI);
Krasnow, M. (PI);
Pfeffer, S. (PI);
Rohatgi, R. (PI);
Salzman, J. (PI);
Spudich, J. (PI);
Straight, A. (PI);
Theriot, J. (PI);
Yeh, E. (PI);
Habebo, T. (GP);
Mesa, J. (GP);
Thompson, J. (GP)
BIOC 459:
Frontiers in Interdisciplinary Biosciences (BIO 459, BIOE 459, CHEM 459, CHEMENG 459, PSYCH 459)
Students register through their affiliated department; otherwise register for CHEMENG 459. For specialists and nonspecialists. Sponsored by the Stanford BioX Program. Three seminars per quarter address scientific and technical themes related to interdisciplinary approaches in bioengineering, medicine, and the chemical, physical, and biological sciences. Leading investigators from Stanford and the world present breakthroughs and endeavors that cut across core disciplines. Preseminars introduce basic concepts and background for nonexperts. Registered students attend all preseminars; others welcome. See http://biox.stanford.edu/courses/459.html. Recommended: basic mathematics, biology, chemistry, and physics.
Terms: Aut, Win, Spr

Units: 1

Repeatable for credit

Grading: Medical Satisfactory/No Credit
Terms: Aut, Win, Spr, Sum

Units: 0

Repeatable for credit

Grading: TGR
Instructors: ;
Artandi, S. (PI);
Beachy, P. (PI);
Brandman, O. (PI);
Brown, P. (PI);
Brutlag, D. (PI);
Chen, J. (PI);
Chu, G. (PI);
Das, R. (PI);
Davis, R. (PI);
Harbury, P. (PI);
Herschlag, D. (PI);
Kim, P. (PI);
Krasnow, M. (PI);
Pfeffer, S. (PI);
Rohatgi, R. (PI);
Salzman, J. (PI);
Spudich, J. (PI);
Straight, A. (PI);
Theriot, J. (PI);
Yeh, E. (PI);
Habebo, T. (GP);
Mesa, J. (GP);
Thompson, J. (GP)
BIOC 802:
TGR Dissertation
Terms: Aut, Win, Spr, Sum

Units: 0

Repeatable for credit

Grading: TGR
Instructors: ;
Artandi, S. (PI);
Beachy, P. (PI);
Brandman, O. (PI);
Brown, P. (PI);
Brutlag, D. (PI);
Chen, J. (PI);
Chu, G. (PI);
Das, R. (PI);
Davis, R. (PI);
Harbury, P. (PI);
Herschlag, D. (PI);
Kim, P. (PI);
Krasnow, M. (PI);
Pfeffer, S. (PI);
Rohatgi, R. (PI);
Salzman, J. (PI);
Spudich, J. (PI);
Straight, A. (PI);
Theriot, J. (PI);
Yeh, E. (PI);
Habebo, T. (GP);
Mesa, J. (GP);
Thompson, J. (GP)
BIOC 215:
Frontiers in Biological Research (DBIO 215, GENE 215)
Literature discussion in conjunction with the Frontiers in Biological Research seminar series in which investigators present current work. Students and faculty meet beforehand to discuss papers from the speaker's primary research literature. Students meet with the speaker after the seminar to discuss their research and future directions, commonly used techniques to study problems in biology, and comparison between the genetic and biochemical approaches in biological research.
Terms: Aut, Win, Spr

Units: 1

Repeatable for credit

Grading: Medical Satisfactory/No Credit