printer friendly pageBIOE 42: Physical Biology
BIOE 42 is designed to introduce students to general engineering principles that have emerged from theory and experiments in biology. Topics covered will cover the scales from molecules to cells to organisms, including fundamental principles of entropy, diffusion, and continuum mechanics. These topics will link to several biological questions, including DNA organization, ligand binding, cytoskeletal mechanics, and the electromagnetic origin of nerve impulses. In all cases, students will learn to develop toy models that can explain quantitative measurements of the function of biological systems. Prerequisites:
MATH 19, 20, 21
CHEM 31A, B (or 31X),
PHYSICS 41; strongly recommended:
CS 106A,
CME 100 or
MATH 51, and
CME 106; or instructor approval.
Terms: Spr
| Units: 4
| UG Reqs: WAY-AQR, WAY-SMA
Instructors:
Bryant, Z. (PI)
;
Garten, M. (SI)
;
Al-Sayyad, N. (TA)
...
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Instructors:
Bryant, Z. (PI)
;
Garten, M. (SI)
;
Al-Sayyad, N. (TA)
;
Henze, D. (TA)
;
Kannan, G. (TA)
;
Karaguesian, J. (TA)
BIOE 244: Advanced Frameworks and Approaches for Engineering Integrated Genetic Systems
Concepts and techniques for the design and implementation of engineered genetic systems. Topics covered include the quantitative exploration of tools that support (a) molecular component engineering, (b) abstraction and composition of functional genetic devices, (c) use of control and dynamical systems theory in device and systems design, (d) treatment of molecular "noise", (e) integration of DNA-encoded programs within cellular chassis, (f) designing for evolution, and (g) the use of standards in measurement, genetic layout architecture, and data exchange. Prerequisites:
CME104,
CME106,
CHEM 33,
BIO41,
BIO42,
BIOE41,
BIOE42, and
BIOE44 (or equivalents), or permission of the instructors.
Last offered: Spring 2019
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