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11 - 20 of 23 results for: BIOE

BIOE 279: Computational Biology: Structure and Organization of Biomolecules and Cells (BIOMEDIN 279, BIOPHYS 279, CME 279, CS 279)

Computational techniques for investigating and designing the three-dimensional structure and dynamics of biomolecules and cells. These computational methods play an increasingly important role in drug discovery, medicine, bioengineering, and molecular biology. Course topics include protein structure prediction, protein design, drug screening, molecular simulation, cellular-level simulation, image analysis for microscopy, and methods for solving structures from crystallography and electron microscopy data. Prerequisites: elementary programming background ( CS 106A or equivalent) and an introductory course in biology or biochemistry.
Terms: Aut | Units: 3 | Grading: Letter or Credit/No Credit

BIOE 283: Mechanotransduction in Cells and Tissues (BIOPHYS 244, ME 244)

Mechanical cues play a critical role in development, normal functioning of cells and tissues, and various diseases. This course will cover what is known about cellular mechanotransduction, or the processes by which living cells sense and respond to physical cues such as physiological forces or mechanical properties of the tissue microenvironment. Experimental techniques and current areas of active investigation will be highlighted.
Terms: Aut | Units: 3 | Grading: Letter or Credit/No Credit

BIOE 291: Principles and Practice of Optogenetics for Optical Control of Biological Tissues

Principles and practice of optical control of biological processes (optogenetics), emphasizing bioengineering approaches. Theoretical, historical, and current practice of the field. Requisite molecular-genetic, optoelectronic, behavioral, clinical, and ethical concepts, and mentored analysis and presentation of relevant papers. Final projects of research proposals and a laboratory component in BioX to provide hands-on training. Contact instructor before registering.
Terms: Aut | Units: 3 | Grading: Letter or Credit/No Credit

BIOE 300B: Engineering Concepts Applied to Physiology

This course focuses on engineering approaches to quantifying, modeling and controlling the physiology and pathophysiology of complex systems, from the level of individual cells to tissue, organ and multi-organ systems.
Terms: Aut | Units: 3 | Grading: Letter (ABCD/NP)

BIOE 301A: Molecular and Cellular Engineering Lab

Preference to Bioengineering graduate students. Practical applications of biotechnology and molecular bioengineering including recombinant DNA techniques, molecular cloning, microbial cell growth and manipulation, and library screening. Emphasis is on experimental design and data analysis. Limited enrollment. Fall
Terms: Spr | Units: 2 | Grading: Letter (ABCD/NP)

BIOE 376: Startup Garage: Design

A hands-on, project-based course, in which teams identify and work with users, domain experts, and industry participants to identify an unmet customer need, design new products or services that meet that need, and develop business models to support the creation and launch of startup products or services. This course integrates methods from human-centered design, lean startup, and business model planning. Each team will conceive, design, build, and field-test critical aspects of both the product or service and the business model.
Terms: Aut | Units: 4 | Grading: Letter or Credit/No Credit

BIOE 390: Introduction to Bioengineering Research (MED 289)

Preference to medical and bioengineering graduate students with first preference given to Bioengineering Scholarly Concentration medical students. Bioengineering is an interdisciplinary field that leverages the disciplines of biology, medicine, and engineering to understand living systems, and engineer biological systems and improve engineering designs and human and environmental health. Students and faculty make presentations during the course. Students expected to make presentations, complete a short paper, read selected articles, and take quizzes on the material.
Terms: Aut | Units: 1-2 | Repeatable for credit | Grading: Medical Satisfactory/No Credit

BIOE 391: Directed Study

May be used to prepare for research during a later quarter in 392. Faculty sponsor required. May be repeated for credit.
Terms: Aut, Win, Spr, Sum | Units: 1-6 | Repeatable for credit | Grading: Satisfactory/No Credit

BIOE 392: Directed Investigation

For Bioengineering graduate students. Previous work in 391 may be required for background; faculty sponsor required. May be repeated for credit.
Terms: Aut, Win, Spr, Sum | Units: 1-10 | Repeatable for credit | Grading: Satisfactory/No Credit
Instructors: Airan, R. (PI) ; Alizadeh, A. (PI) ; Altman, R. (PI) ; Andriacchi, T. (PI) ; Annes, J. (PI) ; Appel, E. (PI) ; Baker, J. (PI) ; Bammer, R. (PI) ; Bao, Z. (PI) ; Barron, A. (PI) ; Batzoglou, S. (PI) ; Bertozzi, C. (PI) ; Bintu, L. (PI) ; Boahen, K. (PI) ; Bowden, A. (PI) ; Bryant, Z. (PI) ; Butte, A. (PI) ; Camarillo, D. (PI) ; Carter, D. (PI) ; Chang, H. (PI) ; Chaudhuri, O. (PI) ; Chen, X. (PI) ; Cheng, C. (PI) ; Chichilnisky, E. (PI) ; Chiu, W. (PI) ; Cochran, J. (PI) ; Contag, C. (PI) ; Covert, M. (PI) ; Curtis, C. (PI) ; Dabiri, J. (PI) ; Dahl, J. (PI) ; Das, R. (PI) ; De Leo, G. (PI) ; Deisseroth, K. (PI) ; Delp, S. (PI) ; Demirci, U. (PI) ; Dionne, J. (PI) ; Elias, J. (PI) ; Endy, D. (PI) ; Engleman, E. (PI) ; Etkin, A. (PI) ; Fahrig, R. (PI) ; Feinstein, J. (PI) ; Feng, L. (PI) ; Fire, A. (PI) ; Fischbach, M. (PI) ; Fordyce, P. (PI) ; Gambhir, S. (PI) ; Ganguli, S. (PI) ; Garcia, C. (PI) ; Glenn, J. (PI) ; Glover, G. (PI) ; Gold, G. (PI) ; Goodman, S. (PI) ; Graves, E. (PI) ; Greenleaf, W. (PI) ; Hargreaves, B. (PI) ; Heilshorn, S. (PI) ; Heller, S. (PI) ; Herschlag, D. (PI) ; Huang, K. (PI) ; Huang, P. (PI) ; Idoyaga, J. (PI) ; Ingelsson, E. (PI) ; Jarosz, D. (PI) ; Jonikas, M. (PI) ; Khuri-Yakub, B. (PI) ; Kim, P. (PI) ; Kovacs, G. (PI) ; Krasnow, M. (PI) ; Krummel, T. (PI) ; Kuhl, E. (PI) ; Kuo, C. (PI) ; Lee, J. (PI) ; Leskovec, J. (PI) ; Levenston, M. (PI) ; Levin, C. (PI) ; Lin, M. (PI) ; Liphardt, J. (PI) ; Longaker, M. (PI) ; Malenka, R. (PI) ; Marsden, A. (PI) ; Monje-Deisseroth, M. (PI) ; Montgomery, S. (PI) ; Moore, T. (PI) ; Nishimura, D. (PI) ; Nolan, G. (PI) ; Nuyujukian, P. (PI) ; O'Brien, L. (PI) ; Okamura, A. (PI) ; Pauly, J. (PI) ; Pauly, K. (PI) ; Pelc, N. (PI) ; Plevritis, S. (PI) ; Prakash, M. (PI) ; Pruitt, B. (PI) ; Qi, S. (PI) ; Quake, S. (PI) ; Rando, T. (PI) ; Raymond, J. (PI) ; Red-Horse, K. (PI) ; Reddy, S. (PI) ; Reijo Pera, R. (PI) ; Relman, D. (PI) ; Riedel-Kruse, I. (PI) ; Rose, J. (PI) ; Saggar, M. (PI) ; Sanger, T. (PI) ; Sapolsky, R. (PI) ; Sattely, E. (PI) ; Schnitzer, M. (PI) ; Scott, M. (PI) ; Shenoy, K. (PI) ; Smolke, C. (PI) ; Soh, H. (PI) ; Soltesz, I. (PI) ; Sonnenburg, J. (PI) ; Spielman, D. (PI) ; Sunwoo, J. (PI) ; Swartz, J. (PI) ; Taylor, C. (PI) ; Theriot, J. (PI) ; Wall, D. (PI) ; Wang, B. (PI) ; Wang, P. (PI) ; Wang, S. (PI) ; Weissman, I. (PI) ; Wernig, M. (PI) ; Woo, J. (PI) ; Wu, J. (PI) ; Wu, S. (PI) ; Wyss-Coray, T. (PI) ; Xing, L. (PI) ; Yang, F. (PI) ; Yang, Y. (PI) ; Yock, P. (PI) ; Zeineh, M. (PI) ; Zenios, S. (PI)

BIOE 393: Bioengineering Departmental Research Colloquium

Bioengineering department labs at Stanford present recent research projects and results. Guest lecturers. Topics include applications of engineering to biology, medicine, biotechnology, and medical technology, including biodesign and devices, molecular and cellular engineering, regenerative medicine and tissue engineering, biomedical imaging, and biomedical computation. Aut, Win, Spr (Lin, Riedel-Kruse, Barron)
Terms: Aut, Win, Spr | Units: 1 | Repeatable for credit | Grading: Satisfactory/No Credit
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