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1 - 10 of 35 results for: BIOMEDIN

BIOMEDIN 109Q: Genomics: A Technical and Cultural Revolution

Preference to sophomores. Concepts of genomics, high-throughput methods of data collection, and computational approaches to analysis of data. The social, ethical, and economic implications of genomic science. Students may focus on computational or social aspects of genomics.
| UG Reqs: Writing 2

BIOMEDIN 156: Economics of Health and Medical Care (BIOMEDIN 256, ECON 126, HRP 256)

Institutional, theoretical, and empirical analysis of the problems of health and medical care. Topics: demand for medical care and medical insurance; institutions in the health sector; economics of information applied to the market for health insurance and for health care; measurement and valuation of health; competition in health care delivery. Graduate students with research interests should take ECON 248. Prerequisites: ECON 50 and ECON 102A or Stats 116 or the equivalent. Recommended: ECON 51.
Terms: Aut | Units: 5 | UG Reqs: WAY-SI

BIOMEDIN 200: Biomedical Informatics Colloquium

Series of colloquia offered by program faculty, students, and occasional guest lecturers. May be repeated three times for credit.
Terms: Aut, Win | Units: 1 | Repeatable 3 times (up to 3 units total)
Instructors: Musen, M. (PI)

BIOMEDIN 201: Biomedical Informatics Student Seminar

Participants report on recent articles from the Biomedical Informatics literature or their research projects. Goals are to teach critical reading of scientific papers and presentation skills. May be repeated three times for credit.
Terms: Aut, Win, Spr, Sum | Units: 1 | Repeatable 3 times (up to 3 units total)
Instructors: Musen, M. (PI)

BIOMEDIN 205: Precision Practice with Big Data

Primarily for M.D. students; open to other graduate students. Provides an overview of how to leverage large amounts of clinical, molecular, and imaging data within hospitals and in cyberspace--big data--to practice medicine more effectively. Lectures by physicians, researchers, and industry leaders survey how the major methods of informatics can help physicians leverage big data to profile disease, to personalize treatment to patients, to predict treatment response, to discover new knowledge, and to challenge established medical dogma and the current paradigm of clinical decision-making based solely on published knowledge and individual physician experience. May be repeated for credit. Prerequisite: background in biomedicine. Background in computer science can be helpful but not required.
Terms: Aut | Units: 1 | Repeatable for credit
Instructors: Rubin, D. (PI)

BIOMEDIN 206: Informatics in Industry

Effective management, modeling, acquisition, and mining of biomedical information in healthcare and biotechnology companies and approaches to information management adopted by companies in this ecosystem. Guest speakers from pharmaceutical/biotechnology companies, clinics/hospitals, health communities/portals, instrumentation/software vendors. May be repeated for credit.
Terms: Spr | Units: 1 | Repeatable for credit

BIOMEDIN 207: Smart Health through Digital Medicine

The widespread use of Health IT, such as electronic health records, and of health applications on the part of patients and consumers, will radically alter the practice of medicine in the coming decades. This seminar, comprised of guest lectures from healthcare professionals in industry and academia, will highlight the practical challenges and successes of health IT design and transformed care delivery programs. The goal of the course is to provide an understanding of how technology designs can advance the delivery and quality of healthcare. In addition to attending lectures, students will be asked to think through a health IT solution to a care delivery problem in a short report.
Terms: Sum | Units: 1
Instructors: Cain, C. (PI)

BIOMEDIN 210: Modeling Biomedical Systems: Ontology, Terminology, Problem Solving (CS 270)

Methods for modeling biomedical systems and for making those models explicit in the context of building software systems. Emphasis is on intelligent systems for decision support and Semantic Web applications. Topics: knowledge representation, controlled terminologies, ontologies, reusable problem solvers, and knowledge acquisition. Recommended: exposure to object-oriented systems, basic biology.
Terms: Win | Units: 3

BIOMEDIN 212: Introduction to Biomedical Informatics Research Methodology (BIOE 212, CS 272, GENE 212)

Hands-on software building. Student teams conceive, design, specify, implement, evaluate, and report on a software project in the domain of biomedicine. Creating written proposals, peer review, providing status reports, and preparing final reports. Guest lectures from professional biomedical informatics systems builders on issues related to the process of project management. Software engineering basics. Prerequisites: BIOMEDIN 210, 211, 214, 217 or consent of instructor.
Terms: Spr | Units: 3
Instructors: Altman, R. (PI)

BIOMEDIN 214: Representations and Algorithms for Computational Molecular Biology (BIOE 214, CS 274, GENE 214)

Topics: introduction to bioinformatics and computational biology, algorithms for alignment of biological sequences and structures, computing with strings, phylogenetic tree construction, hidden Markov models, Gibbs Sampling, basic structural computations on proteins, protein structure prediction, protein threading techniques, homology modeling, molecular dynamics and energy minimization, statistical analysis of 3D biological data, integration of data sources, knowledge representation and controlled terminologies for molecular biology, microarray analysis, machine learning (clustering and classification), and natural language text processing. Prerequisites: programming skills; consent of instructor for 3 units.
Terms: Aut | Units: 3-4
Instructors: Altman, R. (PI)
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