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1 - 10 of 17 results for: BIOMEDIN ; Currently searching spring courses. You can expand your search to include all quarters

BIOMEDIN 156: Economics of Health and Medical Care (BIOMEDIN 256, ECON 126, HRP 256)

Institutional, theoretical, and empirical analysis of the problems of health and medical care. Topics: demand for medical care and medical insurance; institutions in the health sector; economics of information applied to the market for health insurance and for health care; measurement and valuation of health; competition in health care delivery. Graduate students with research interests should take ECON 249. Prerequisites: ECON 50 and either ECON 102A or STATS 116 or the equivalent. Recommended: ECON 51.
Terms: Spr | Units: 5 | UG Reqs: WAY-SI | Grading: Medical Option (Med-Ltr-CR/NC)

BIOMEDIN 201: Biomedical Informatics Student Seminar

Participants report on recent articles from the Biomedical Informatics literature or their research projects. Goals are to teach critical reading of scientific papers and presentation skills. May be repeated three times for credit.
Terms: Aut, Win, Spr, Sum | Units: 1 | Repeatable for credit | Grading: Medical Satisfactory/No Credit
Instructors: Musen, M. (PI)

BIOMEDIN 206: Informatics in Industry

Effective management, modeling, acquisition, and mining of biomedical information in healthcare and biotechnology companies and approaches to information management adopted by companies in this ecosystem. Guest speakers from pharmaceutical/biotechnology companies, clinics/hospitals, health communities/portals, instrumentation/software vendors. May be repeated for credit.
Terms: Spr | Units: 1 | Repeatable for credit | Grading: Medical Satisfactory/No Credit
Instructors: Shah, N. (PI)

BIOMEDIN 212: Introduction to Biomedical Informatics Research Methodology (BIOE 212, CS 272, GENE 212)

Capstone Biomedical Informatics (BMI) experience. Hands-on software building. Student teams conceive, design, specify, implement, evaluate, and report on a software project in the domain of biomedicine. Creating written proposals, peer review, providing status reports, and preparing final reports. Issues related to research reproducibility. Guest lectures from professional biomedical informatics systems builders on issues related to the process of project management. Software engineering basics. Because the team projects start in the first week of class, attendance that week is strongly recommended. Prerequisites: BIOMEDIN 210 or 211 or 214 or 217. Preference to BMI graduate students. Consent of instructor required.
Terms: Spr | Units: 3-5 | Grading: Medical Option (Med-Ltr-CR/NC)

BIOMEDIN 224: Principles of Pharmacogenomics (GENE 224)

This course is an introduction to pharmacogenomics, including the relevant pharmacology, genomics, experimental methods (sequencing, expression, genotyping), data analysis methods and bioinformatics. The course reviews key gene classes (e.g., cytochromes, transporters) and key drugs (e.g., warfarin, clopidogrel, statins, cancer drugs) in the field. Resources for pharmacogenomics (e.g., PharmGKB, Drugbank, NCBI resources) are reviewed, as well as issues implementing pharmacogenomics testing in the clinical setting. Reading of key papers, including student presentations of this work; problem sets; final project selected with approval of instructor. Prerequisites: two of BIO 41, 42, 43, 44X, 44Y or consent of instructor.
Terms: Aut, Win, Spr, Sum | Units: 3 | Grading: Medical Option (Med-Ltr-CR/NC)

BIOMEDIN 245: Statistical and Machine Learning Methods for Genomics (BIO 268, CS 373, GENE 245, STATS 345)

Introduction to statistical and computational methods for genomics. Sample topics include: expectation maximization, hidden Markov model, Markov chain Monte Carlo, ensemble learning, probabilistic graphical models, kernel methods and other modern machine learning paradigms. Rationales and techniques illustrated with existing implementations used in population genetics, disease association, and functional regulatory genomics studies. Instruction includes lectures and discussion of readings from primary literature. Homework and projects require implementing some of the algorithms and using existing toolkits for analysis of genomic datasets.
Terms: Spr | Units: 3 | Grading: Medical Option (Med-Ltr-CR/NC)

BIOMEDIN 251: Outcomes Analysis (HRP 252, MED 252)

Methods of conducting empirical studies which use large existing medical, survey, and other databases to ask both clinical and policy questions. Econometric and statistical models used to conduct medical outcomes research. How research is conducted on medical and health economics questions when a randomized trial is impossible. Problem sets emphasize hands-on data analysis and application of methods, including re-analyses of well-known studies. Prerequisites: one or more courses in probability, and statistics or biostatistics.
Terms: Spr | Units: 4 | Grading: Medical Option (Med-Ltr-CR/NC)

BIOMEDIN 256: Economics of Health and Medical Care (BIOMEDIN 156, ECON 126, HRP 256)

Institutional, theoretical, and empirical analysis of the problems of health and medical care. Topics: demand for medical care and medical insurance; institutions in the health sector; economics of information applied to the market for health insurance and for health care; measurement and valuation of health; competition in health care delivery. Graduate students with research interests should take ECON 249. Prerequisites: ECON 50 and either ECON 102A or STATS 116 or the equivalent. Recommended: ECON 51.
Terms: Spr | Units: 5 | Grading: Medical Option (Med-Ltr-CR/NC)

BIOMEDIN 260: Computational Methods for Biomedical Image Analysis and Interpretation (RAD 260)

The latest biological and medical imaging modalities and their applications in research and medicine. Focus is on computational analytic and interpretive approaches to optimize extraction and use of biological and clinical imaging data for diagnostic and therapeutic translational medical applications. Topics include major image databases, fundamental methods in image processing and quantitative extraction of image features, structured recording of image information including semantic features and ontologies, indexing, search and content-based image retrieval. Case studies include linking image data to genomic, phenotypic and clinical data, developing representations of image phenotypes for use in medical decision support and research applications and the role that biomedical imaging informatics plays in new questions in biomedical science. Includes a project. Enrollment for 3 units requires instructor consent. Prerequisites: programming ability at the level of CS 106A, familiarity with statistics, basic biology. Knowledge of Matlab highly recommended.
Terms: Spr | Units: 3-4 | Grading: Medical Option (Med-Ltr-CR/NC)

BIOMEDIN 290: Biomedical Informatics Teaching Methods

Hands-on training in biomedical informatics pedagogy. Practical experience in pedagogical approaches, variously including didactic, inquiry, project, team, case, field, and/or problem-based approaches. Students create course content, including lectures, exercises, and assessments, and evaluate learning activities and outcomes. Prerequisite: instructor consent.
Terms: Aut, Win, Spr, Sum | Units: 1-6 | Repeatable for credit | Grading: Medical Option (Med-Ltr-CR/NC)
Instructors: Altman, R. (PI) ; Ashley, E. (PI) ; Bagley, S. (PI) ; Bassik, M. (PI) ; Batzoglou, S. (PI) ; Bayati, M. (PI) ; Bejerano, G. (PI) ; Bhattacharya, J. (PI) ; Blish, C. (PI) ; Boahen, K. (PI) ; Brandeau, M. (PI) ; Brutlag, D. (PI) ; Bustamante, C. (PI) ; Butte, A. (PI) ; Chang, H. (PI) ; Cherry, J. (PI) ; Cohen, S. (PI) ; Covert, M. (PI) ; Curtis, C. (PI) ; Das, A. (PI) ; Das, R. (PI) ; Davis, R. (PI) ; Delp, S. (PI) ; Desai, M. (PI) ; Dill, D. (PI) ; Dumontier, M. (PI) ; Elias, J. (PI) ; Fagan, L. (PI) ; Feldman, M. (PI) ; Ferrell, J. (PI) ; Fraser, H. (PI) ; Gambhir, S. (PI) ; Gerritsen, M. (PI) ; Gevaert, O. (PI) ; Goldstein, M. (PI) ; Greenleaf, W. (PI) ; Guibas, L. (PI) ; Hastie, T. (PI) ; Hlatky, M. (PI) ; Holmes, S. (PI) ; Ji, H. (PI) ; Karp, P. (PI) ; Khatri, P. (PI) ; Kim, S. (PI) ; Kirkegaard, K. (PI) ; Klein, T. (PI) ; Koller, D. (PI) ; Krummel, T. (PI) ; Kundaje, A. (PI) ; Levitt, M. (PI) ; Levitt, R. (PI) ; Li, J. (PI) ; Longhurst, C. (PI) ; Lowe, H. (PI) ; Mallick, P. (PI) ; Manning, C. (PI) ; McAdams, H. (PI) ; Meng, T. (PI) ; Menon, V. (PI) ; Montgomery, S. (PI) ; Musen, M. (PI) ; Napel, S. (PI) ; Nolan, G. (PI) ; Olshen, R. (PI) ; Owen, A. (PI) ; Owens, D. (PI) ; Paik, D. (PI) ; Palacios, J. (PI) ; Pande, V. (PI) ; Petrov, D. (PI) ; Plevritis, S. (PI) ; Poldrack, R. (PI) ; Pritchard, J. (PI) ; Relman, D. (PI) ; Riedel-Kruse, I. (PI) ; Rivas, M. (PI) ; Rubin, D. (PI) ; Sabatti, C. (PI) ; Salzman, J. (PI) ; Shachter, R. (PI) ; Shafer, R. (PI) ; Shah, N. (PI) ; Sherlock, G. (PI) ; Sidow, A. (PI) ; Snyder, M. (PI) ; Tang, H. (PI) ; Taylor, C. (PI) ; Theriot, J. (PI) ; Tibshirani, R. (PI) ; Utz, P. (PI) ; Walker, M. (PI) ; Wall, D. (PI) ; Winograd, T. (PI) ; Wong, W. (PI) ; Xing, L. (PI) ; Zou, J. (PI)
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