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1 - 10 of 43 results for: BIOE

BIOE 45SI: A Project-Based Introduction to Synthetic Biology

Emphasis is on acquiring and developing the tools and skills needed to work collaboratively and lead teams within interdisciplinary research environments. Cutting edge topics, challenges, and opportunities at the intersection of biology and biotechnology. How to design and implement projects that are responsive to real-world problems using biological technologies, and assess projects based on their significance, feasibility, and costs. Course work includes daily hands-on projects, discussion, and presentations.
Terms: Spr | Units: 2
Instructors: Endy, D. (PI)

BIOE 70Q: Medical Device Innovation

Preference to sophomores. Commonly used medical devices in different medical specialties. Guest lecturers include Stanford Medical School physicians, entrepreneurs, and venture capitalists. How to identify clinical needs and design device solutions to address these needs. Fundamentals of starting a company. Field trips to local medical device companies; workshops. No previous engineering training required.
Last offered: Spring 2008 | UG Reqs: WAY-CE

BIOE 144: Lectures and Dialogue on Synthetic Biology

New foundational tools that are making biology easier to engineer. Topics include DNA synthesis, RNA, protein, and cellular engineering, programmed pattern formation, standardization, and abstraction. Current and future applications of biotechnology. Social issues such as ethics, safety, security, and ownership, sharing, and innovation frameworks. All majors welcome; optional weekly background tutorial.
Terms: Win | Units: 3
Instructors: Endy, D. (PI)

BIOE 191: Bioengineering Problems and Experimental Investigation

Directed study and research for undergraduates on a subject of mutual interest to student and instructor. Prerequisites: consent of instructor and adviser. (Staff)
Terms: Aut, Win, Spr, Sum | Units: 1-5 | Repeatable for credit

BIOE 212: Introduction to Biomedical Informatics Research Methodology (BIOMEDIN 212, CS 272, GENE 212)

Hands-on software building. Student teams conceive, design, specify, implement, evaluate, and report on a software project in the domain of biomedicine. Creating written proposals, peer review, providing status reports, and preparing final reports. Guest lectures from professional biomedical informatics systems builders on issues related to the process of project management. Software engineering basics. Prerequisites: 210, 211 or 214, or consent of instructor.
Terms: Aut | Units: 3

BIOE 214: Representations and Algorithms for Computational Molecular Biology (BIOMEDIN 214, CS 274, GENE 214)

Topics: algorithms for alignment of biological sequences and structures, computing with strings, phylogenetic tree construction, hidden Markov models, computing with networks of genes, basic structural computations on proteins, protein structure prediction, protein threading techniques, homology modeling, molecular dynamics and energy minimization, statistical analysis of 3D biological data, integration of data sources, knowledge representation and controlled terminologies for molecular biology, graphical display of biological data, machine learning (clustering and classification), and natural language text processing. Prerequisites: programming skills; consent of instructor for 3 units.
Terms: Spr | Units: 3-4
Instructors: Altman, R. (PI)

BIOE 220: Imaging Anatomy (RAD 220)

The physics of medical imaging and human anatomy through medical images. Emphasis is on normal anatomy, contrast mechanisms, and the relative strengths of each imaging modality. Labs reinforce imaging techniques and anatomy. Prerequisites: basic biology, physics.
Terms: Win | Units: 3

BIOE 222A: Multimodality Molecular Imaging in Living Subjects I (RAD 222A)

Instruments for imaging molecular and cellular events in animals and human beings using novel assays. Instrumentation physics, chemistry of molecular imaging probes, and applications to preclinical models and clinical disease management.
Terms: Aut | Units: 4

BIOE 222B: Multimodality Molecular Imaging in Living Subjects II (RAD 222B)

In vivo imaging techniques and applications to preclinical models and clinical disease management. Focus on cancer research, neurobiology, cardiovascular and musculoskeletal diseases.
Terms: Win | Units: 2

BIOE 261: Principles and Practice of Stem Cell Engineering

Quantitative models used to characterize incorporation of new cells into existing tissues emphasizing pluripotent cells such as embryonic and neural stem cells. Molecular methods to control stem cell decisions to self-renew, differentiate, die, or become quiescent. Practical, industrial, and ethical aspects of stem cell technology application. Final projects: team-reviewed grants and business proposals.
Terms: Aut | Units: 3
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