MI 70Q:
Photographing Nature
Utilizes the idiom of photography to learn about nature, enhance observation, and explore scientific concepts. Builds upon the pioneering photographic work of Eadweard J. Muybridge on human and animal locomotion. A secondary goal is to learn the grammar, syntax, composition, and style of nature photography to enhance the use of this medium as a form of scientific communication and also to explore the themes of change across time and space. Scientific themes to be explored include: taxonomy, habitat preservation, climate change; species diversity; survival and reproductive strategies; ecological niches and coevolution, carrying capacity and sustainability, population densities, predation, and predatorprey relationships, openspace management, the physics of photography. Extensive use of field trips and class critque.
Terms: Aut

Units: 3

Grading: Satisfactory/No Credit
MI 115C:
Human Virology Inquiry Project
Selected topics in human virology focusing on current issues in the field. Topics will include: clinical features of infection, epidemiology, molecular virology, drug development and policy, vaccinology, pathogenesis, host modulation, emerging infection, and media representations of viral infection. Student presentations and discussion in a small group setting. Prerequisite: concurrent enrollment in MI 155 Humans and Viruses.
Terms: Aut, Win

Units: 1

Repeatable for credit

Grading: Credit/No Credit
MI 155A:
Humans and Viruses I (HUMBIO 155H)
Introduction to human virology integrating epidemiology, molecular biology, clinical sciences, social sciences, history, and the arts. Emphasis is on host pathogen interactions and policy issues. Topics: polio and vaccination, smallpox and eradication, yellow fever and history, influenza and genomic diversity, rubella and childhood infections, adenovirus and viral morphology, ebola and emerging infection, lassa fever and immune response. Prerequisite: Concurrent enrollment in MI 155B or HUMBIO 155V.
Terms: Aut

Units: 3

Grading: Letter (ABCD/NP)
MI 155B:
Humans and Viruses II (HUMBIO 155V)
Introduction to human virology integrating epidemiology, molecular biology, clinical sciences, social sciences, history, and the arts. Emphasis on host pathogen interactions and policy issues. Topics: measles and viral epidemiology, rotavirus and world health, rabies and infections of the brain, HPV and cancer causing viruses, herpes simplex and viral latency, CMV and viral teratogenesis, retrovirology and endogenous viral sequences, HIV and viral treatement, viral hepatitis and chronic infections, prions and diseases of life style. Prerequisite: Concurrent enrollment with MI155A or HUMBIO 155H.
Terms: Aut

Units: 3

Grading: Letter (ABCD/NP)
MI 198:
Directed Reading in Microbiology and Immunology
Fields of study are decided in consultation with sponsoring professor. Prerequisite: consent of instructor.
Terms: Aut, Win, Spr, Sum

Units: 115

Repeatable for credit

Grading: Letter or Credit/No Credit
Instructors: ;
Amieva, M. (PI);
Blau, H. (PI);
Boothroyd, J. (PI);
Carette, J. (PI);
Chen, C. (PI);
Chien, Y. (PI);
Contag, C. (PI);
Davis, M. (PI);
Falkow, S. (PI);
Kirkegaard, K. (PI);
Matin, A. (PI);
Monack, D. (PI);
Nolan, G. (PI);
Relman, D. (PI);
Sarnow, P. (PI);
Schneider, D. (PI);
Siegel, R. (PI);
Singh, U. (PI);
Sonnenburg, J. (PI);
Theriot, J. (PI)
MI 199:
Undergraduate Research
Investigations sponsored by individual faculty members. Possible fields: microbial molecular biology and physiology, microbial pathogenicity, immunology, virology, and molecular parasitology. Prerequisite: consent of instructor.
Terms: Aut, Win, Spr, Sum

Units: 118

Repeatable for credit

Grading: Letter or Credit/No Credit
Instructors: ;
Amieva, M. (PI);
Arvin, A. (PI);
Blau, H. (PI);
Bogyo, M. (PI);
Boothroyd, J. (PI);
Carette, J. (PI);
Chen, C. (PI);
Chien, Y. (PI);
Contag, C. (PI);
Davis, M. (PI);
Einav, S. (PI);
Falkow, S. (PI);
Galli, S. (PI);
Glenn, J. (PI);
Greenberg, H. (PI);
Huang, K. (PI);
Idoyaga, J. (PI);
Jackson, P. (PI);
Kirkegaard, K. (PI);
Maecker, H. (PI);
Matin, A. (PI);
McDevitt, H. (PI);
Mocarski, E. (PI);
Monack, D. (PI);
Nolan, G. (PI);
Parham, P. (PI);
Pizzo, P. (PI);
Prober, C. (PI);
Relman, D. (PI);
Sarnow, P. (PI);
Schneider, D. (PI);
Schoolnik, G. (PI);
Siegel, R. (PI);
Singh, U. (PI);
Sonnenburg, J. (PI);
Theriot, J. (PI);
Tompkins, L. (PI);
Yeh, E. (PI)
MI 210:
Advanced Pathogenesis of Bacteria, Viruses, and Eukaryotic Parasites
For graduate and medical students, and advanced undergraduates; required of firstyear graduate students in Microbiology and Immunology. The molecular mechanisms by which microorganisms invade animal and human hosts, express their genomes, interact with macromolecular pathways in the infected host, and induce disease. Current literature. Undergraduate students interested in taking this class must meet with the instructor to obtain approval before enrolling.
Terms: Aut

Units: 4

Grading: Medical Option (MedLtrCR/NC)
MI 215T:
Teaching Virology
This course focuses on the pedagogy surrounding virology instruction. The course focuses on educational principles and uses a variety of formats including lectures, discussion, with emphasis on handson experience in the form of a teaching practicum. Topics includes syllabus organization, problem set, exam writing, grading rubrics, active learning, model building, stimulation discussion , the use of online media and evaluation.
Terms: Aut, Win, Spr, Sum

Units: 15

Repeatable for credit

Grading: Medical Option (MedLtrCR/NC)
MI 250:
Frontiers in Microbiology and Immunology
Required of first and secondyear students in Microbiology and Immunology. How to evaluate biological research. Held in conjunction with the Microbiology and Immunology Friday noon seminar series. Before the seminar, students and faculty discuss one or more papers from the speaker's primary research literature on a related topic. After the seminar, students meet informally with the speaker to discuss their research.
Terms: Aut, Win, Spr

Units: 1

Repeatable for credit

Grading: Medical Option (MedLtrCR/NC)
MI 299:
Directed Reading in Microbiology and Immunology
Prerequisite: consent of instructor.
Terms: Aut, Win, Spr, Sum

Units: 118

Repeatable for credit

Grading: Medical Satisfactory/No Credit
Instructors: ;
Amieva, M. (PI);
Arvin, A. (PI);
Blau, H. (PI);
Bogyo, M. (PI);
Boothroyd, J. (PI);
Carette, J. (PI);
Chen, C. (PI);
Chien, Y. (PI);
Contag, C. (PI);
Davis, M. (PI);
Einav, S. (PI);
Falkow, S. (PI);
Galli, S. (PI);
Glenn, J. (PI);
Greenberg, H. (PI);
Huang, K. (PI);
Idoyaga, J. (PI);
Jackson, P. (PI);
Kirkegaard, K. (PI);
Maecker, H. (PI);
Matin, A. (PI);
McDevitt, H. (PI);
Mocarski, E. (PI);
Monack, D. (PI);
Nolan, G. (PI);
Parham, P. (PI);
Pizzo, P. (PI);
Prober, C. (PI);
Relman, D. (PI);
Sarnow, P. (PI);
Schneider, D. (PI);
Schoolnik, G. (PI);
Siegel, R. (PI);
Singh, U. (PI);
Sonnenburg, J. (PI);
Theriot, J. (PI);
Tompkins, L. (PI);
Yeh, E. (PI)
MI 370:
Medical Scholars Research
Provides an opportunity for student and faculty interaction, as well as academic credit and financial support, to medical students who undertake original research. Enrollment is limited to students with approved projects.
Terms: Aut, Win, Spr, Sum

Units: 418

Repeatable for credit

Grading: Medical School MD Grades
Instructors: ;
Amieva, M. (PI);
Arvin, A. (PI);
Blau, H. (PI);
Bogyo, M. (PI);
Boothroyd, J. (PI);
Carette, J. (PI);
Chen, C. (PI);
Chien, Y. (PI);
Contag, C. (PI);
Davis, M. (PI);
Einav, S. (PI);
Falkow, S. (PI);
Galli, S. (PI);
Glenn, J. (PI);
Greenberg, H. (PI);
Huang, K. (PI);
Idoyaga, J. (PI);
Jackson, P. (PI);
Kirkegaard, K. (PI);
Maecker, H. (PI);
Matin, A. (PI);
McDevitt, H. (PI);
Mocarski, E. (PI);
Monack, D. (PI);
Nolan, G. (PI);
Parham, P. (PI);
Pizzo, P. (PI);
Prober, C. (PI);
Relman, D. (PI);
Sarnow, P. (PI);
Schneider, D. (PI);
Schoolnik, G. (PI);
Siegel, R. (PI);
Singh, U. (PI);
Sonnenburg, J. (PI);
Theriot, J. (PI);
Tompkins, L. (PI);
Yeh, E. (PI)
MI 399:
Graduate Research
Students who have completed the necessary foundation courses undertake investigations in general bacteriology, bacterial physiology and ecology, bacterial genetics, microbial pathogenicity, immunology, parasitology, or virology sponsored by individual faculty members. Prerequisite: consent of instructor.
Terms: Aut, Win, Spr, Sum

Units: 118

Repeatable for credit

Grading: Medical Satisfactory/No Credit
Instructors: ;
Amieva, M. (PI);
Arvin, A. (PI);
Blau, H. (PI);
Bogyo, M. (PI);
Bollyky, P. (PI);
Boothroyd, J. (PI);
Carette, J. (PI);
Chen, C. (PI);
Chien, Y. (PI);
Contag, C. (PI);
Davis, M. (PI);
Egan, E. (PI);
Einav, S. (PI);
Falkow, S. (PI);
Galli, S. (PI);
Glenn, J. (PI);
Greenberg, H. (PI);
Huang, K. (PI);
Idoyaga, J. (PI);
Jackson, P. (PI);
Kirkegaard, K. (PI);
Maecker, H. (PI);
Matin, A. (PI);
McDevitt, H. (PI);
Mocarski, E. (PI);
Monack, D. (PI);
Nolan, G. (PI);
Parham, P. (PI);
Pizzo, P. (PI);
Prober, C. (PI);
Relman, D. (PI);
Sarnow, P. (PI);
Schneider, D. (PI);
Schoolnik, G. (PI);
Siegel, R. (PI);
Singh, U. (PI);
Sonnenburg, J. (PI);
Theriot, J. (PI);
Tompkins, L. (PI);
Yeh, E. (PI)
MI 801:
TGR Master's Project
Terms: Aut, Win, Spr, Sum

Units: 0

Repeatable for credit

Grading: TGR
Instructors: ;
Amieva, M. (PI);
Arvin, A. (PI);
Blau, H. (PI);
Bogyo, M. (PI);
Boothroyd, J. (PI);
Carette, J. (PI);
Chen, C. (PI);
Chien, Y. (PI);
Contag, C. (PI);
Davis, M. (PI);
Einav, S. (PI);
Falkow, S. (PI);
Galli, S. (PI);
Glenn, J. (PI);
Greenberg, H. (PI);
Huang, K. (PI);
Idoyaga, J. (PI);
Jackson, P. (PI);
Kirkegaard, K. (PI);
Maecker, H. (PI);
Matin, A. (PI);
McDevitt, H. (PI);
Mocarski, E. (PI);
Monack, D. (PI);
Nolan, G. (PI);
Parham, P. (PI);
Pizzo, P. (PI);
Prober, C. (PI);
Relman, D. (PI);
Sarnow, P. (PI);
Schneider, D. (PI);
Schoolnik, G. (PI);
Siegel, R. (PI);
Singh, U. (PI);
Sonnenburg, J. (PI);
Theriot, J. (PI);
Tompkins, L. (PI);
Yeh, E. (PI)
MI 802:
TGR PhD Dissertation
Terms: Aut, Win, Spr, Sum

Units: 0

Repeatable for credit

Grading: TGR
Instructors: ;
Amieva, M. (PI);
Arvin, A. (PI);
Blau, H. (PI);
Bogyo, M. (PI);
Bollyky, P. (PI);
Boothroyd, J. (PI);
Carette, J. (PI);
Chen, C. (PI);
Chien, Y. (PI);
Contag, C. (PI);
Davis, M. (PI);
Egan, E. (PI);
Einav, S. (PI);
Falkow, S. (PI);
Galli, S. (PI);
Glenn, J. (PI);
Greenberg, H. (PI);
Huang, K. (PI);
Idoyaga, J. (PI);
Jackson, P. (PI);
Kirkegaard, K. (PI);
Maecker, H. (PI);
Matin, A. (PI);
McDevitt, H. (PI);
Mocarski, E. (PI);
Monack, D. (PI);
Nolan, G. (PI);
Parham, P. (PI);
Pizzo, P. (PI);
Prober, C. (PI);
Relman, D. (PI);
Sarnow, P. (PI);
Schneider, D. (PI);
Schoolnik, G. (PI);
Siegel, R. (PI);
Singh, U. (PI);
Sonnenburg, J. (PI);
Theriot, J. (PI);
Tompkins, L. (PI);
Yeh, E. (PI)