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MI 198: Directed Reading in Microbiology and Immunology

Fields of study are decided in consultation with sponsoring professor. Prerequisite: consent of instructor.
Terms: Aut, Win, Spr, Sum | Units: 1-15 | Repeatable for credit
Instructors: ; Amieva, M. (PI); Blau, H. (PI); Boothroyd, J. (PI); Carette, J. (PI); Chen, C. (PI); Chien, Y. (PI); Contag, C. (PI); Davis, M. (PI); Falkow, S. (PI); Kirkegaard, K. (PI); Matin, A. (PI); Monack, D. (PI); Nolan, G. (PI); Relman, D. (PI); Sarnow, P. (PI); Schneider, D. (PI); Siegel, R. (PI); Singh, U. (PI); Sonnenburg, J. (PI); Choudhry, S. (GP)

MI 199: Undergraduate Research

Investigations sponsored by individual faculty members. Possible fields: microbial molecular biology and physiology, microbial pathogenicity, immunology, virology, and molecular parasitology. Prerequisite: consent of instructor.
Terms: Aut, Win, Spr, Sum | Units: 1-18 | Repeatable for credit
Instructors: ; Amieva, M. (PI); Arvin, A. (PI); Blau, H. (PI); Bogyo, M. (PI); Boothroyd, J. (PI); Carette, J. (PI); Chen, C. (PI); Chien, Y. (PI); Chiu, W. (PI); Contag, C. (PI); Davis, M. (PI); Einav, S. (PI); Falkow, S. (PI); Galli, S. (PI); Glenn, J. (PI); Greenberg, H. (PI); Howitt, M. (PI); Huang, K. (PI); Idoyaga, J. (PI); Jackson, P. (PI); Kirkegaard, K. (PI); Maecker, H. (PI); Matin, A. (PI); Mocarski, E. (PI); Monack, D. (PI); Nolan, G. (PI); Parham, P. (PI); Pizzo, P. (PI); Prober, C. (PI); Relman, D. (PI); Sarnow, P. (PI); Schneider, D. (PI); Schoolnik, G. (PI); Siegel, R. (PI); Singh, U. (PI); Sonnenburg, J. (PI); Tompkins, L. (PI); Yeh, E. (PI); Choudhry, S. (GP)

MI 200: Cellular and Molecular Immunology: An Introductory Course (BIO 230, IMMUNOL 200)

Mechanisms of immune responses in health and disease. Innate and adaptive immunity; development of the immune system; molecular biology, structure, and function of antibodies and T-cell receptors; cellular basis and regulation of immune responses; infectious diseases and vaccines; allergy, inflammation, and autoimmunity. COVID-19 will be featured as a major example. Lectures and discussion in class and in sections. For upper class undergraduate and graduate students who have not had an introductory immunology course. Prerequisites for undergraduates: Biology Core, Human Biology Core, or BIO 83 and 86, or consent of instructor. For graduate students: College-level molecular biology, biochemistry, and cell biology, or consent of instructor.
Terms: Aut | Units: 4
Instructors: ; Howitt, M. (PI); Jagannathan, P. (PI); Barron, G. (TA); Francois, A. (TA); Nico, K. (TA); Rubio, A. (TA)

MI 250: Frontiers in Microbiology and Immunology

Required of first- and second-year students in Microbiology and Immunology. How to evaluate biological research. Held in conjunction with the Microbiology and Immunology Friday noon seminar series. Before the seminar, students and faculty discuss one or more papers from the speaker's primary research literature on a related topic. After the seminar, students meet informally with the speaker to discuss their research.
Terms: Aut, Win, Spr | Units: 1 | Repeatable for credit
Instructors: ; Carette, J. (PI); Sonnenburg, J. (PI)

MI 260: Creative Visualization Studio

In this class, we will teach students to build small, physical explanations of their data for display and use as visual aids in person, at a poster or in a talk. We will use a range of media, including laser cutters, paper cutters, silk screening, CNC routing, 3D printing, jewelry making, embroidery, mold making, stop motion animation, or stained glass cutting. Classes will be split into workshop time¿for learning techniques and brainstorming¿and lab time, where students can work on individual projects. Students will be expected to complete 5 small visualization projects over the course of the quarter. Permission numbers are required to enroll. To obtain a permission number please email Professor David Schneider at dschneid@stanford.edu.
Terms: Aut, Win, Spr, Sum | Units: 1-2 | Repeatable 6 times (up to 12 units total)
Instructors: ; Schneider, D. (PI)

MI 299: Directed Reading in Microbiology and Immunology

Prerequisite: consent of instructor.
Terms: Aut, Win, Spr, Sum | Units: 1-18 | Repeatable for credit
Instructors: ; Amieva, M. (PI); Arvin, A. (PI); Blau, H. (PI); Bogyo, M. (PI); Boothroyd, J. (PI); Carette, J. (PI); Chen, C. (PI); Chien, Y. (PI); Contag, C. (PI); Davis, M. (PI); Einav, S. (PI); Falkow, S. (PI); Galli, S. (PI); Glenn, J. (PI); Greenberg, H. (PI); Huang, K. (PI); Idoyaga, J. (PI); Jackson, P. (PI); Kirkegaard, K. (PI); Maecker, H. (PI); Matin, A. (PI); Mocarski, E. (PI); Monack, D. (PI); Nolan, G. (PI); Parham, P. (PI); Pizzo, P. (PI); Prober, C. (PI); Relman, D. (PI); Sarnow, P. (PI); Schneider, D. (PI); Schoolnik, G. (PI); Siegel, R. (PI); Singh, U. (PI); Sonnenburg, J. (PI); Tompkins, L. (PI); Yeh, E. (PI); Choudhry, S. (GP)

MI 370: Medical Scholars Research

Provides an opportunity for student and faculty interaction, as well as academic credit and financial support, to medical students who undertake original research. Enrollment is limited to students with approved projects.
Terms: Aut, Win, Spr, Sum | Units: 4-18 | Repeatable for credit
Instructors: ; Amieva, M. (PI); Arvin, A. (PI); Blau, H. (PI); Bogyo, M. (PI); Boothroyd, J. (PI); Carette, J. (PI); Chen, C. (PI); Chien, Y. (PI); Contag, C. (PI); Davis, M. (PI); Einav, S. (PI); Falkow, S. (PI); Galli, S. (PI); Glenn, J. (PI); Greenberg, H. (PI); Huang, K. (PI); Idoyaga, J. (PI); Jackson, P. (PI); Kirkegaard, K. (PI); Maecker, H. (PI); Matin, A. (PI); Mocarski, E. (PI); Monack, D. (PI); Nolan, G. (PI); Parham, P. (PI); Pizzo, P. (PI); Prober, C. (PI); Relman, D. (PI); Sarnow, P. (PI); Schneider, D. (PI); Schoolnik, G. (PI); Siegel, R. (PI); Singh, U. (PI); Sonnenburg, J. (PI); Tompkins, L. (PI); Yeh, E. (PI); Choudhry, S. (GP)

MI 399: Graduate Research

Students who have completed the necessary foundation courses undertake investigations in general bacteriology, bacterial physiology and ecology, bacterial genetics, microbial pathogenicity, immunology, parasitology, or virology sponsored by individual faculty members. Prerequisite: consent of instructor.
Terms: Aut, Win, Spr, Sum | Units: 1-18 | Repeatable for credit
Instructors: ; Amieva, M. (PI); Arvin, A. (PI); Bando, J. (PI); Barnes, C. (PI); Bhatt, A. (PI); Blau, H. (PI); Blish, C. (PI); Bogyo, M. (PI); Bollyky, P. (PI); Boothroyd, J. (PI); Boyd, S. (PI); Carette, J. (PI); Chen, C. (PI); Chien, Y. (PI); Chiu, W. (PI); Contag, C. (PI); Dassama, L. (PI); Davis, M. (PI); Dodd, D. (PI); Egan, E. (PI); Einav, S. (PI); Endy, D. (PI); Falkow, S. (PI); Galli, S. (PI); Glenn, J. (PI); Greenberg, H. (PI); Howitt, M. (PI); Huang, K. (PI); Idoyaga, J. (PI); Jackson, P. (PI); Jacobs-Wagner, C. (PI); Jagannathan, P. (PI); Kim, P. (PI); Kirkegaard, K. (PI); Maecker, H. (PI); Matin, A. (PI); Mocarski, E. (PI); Monack, D. (PI); Mudgett, M. (PI); Nolan, G. (PI); Parham, P. (PI); Pham, T. (PI); Pizzo, P. (PI); Prober, C. (PI); Relman, D. (PI); Rutaganira, F. (PI); Sarnow, P. (PI); Schneider, D. (PI); Schoolnik, G. (PI); Siegel, R. (PI); Singh, U. (PI); Sonnenburg, J. (PI); Tompkins, L. (PI); Wang, T. (PI); Yang, P. (PI); Yeh, E. (PI); Choudhry, S. (GP); Dang, V. (GP); Scallan, C. (GP)

MI 801: TGR Master's Project

Terms: Aut, Win, Spr, Sum | Units: 0 | Repeatable for credit
Instructors: ; Amieva, M. (PI); Arvin, A. (PI); Blau, H. (PI); Bogyo, M. (PI); Boothroyd, J. (PI); Carette, J. (PI); Chen, C. (PI); Chien, Y. (PI); Contag, C. (PI); Davis, M. (PI); Einav, S. (PI); Falkow, S. (PI); Galli, S. (PI); Glenn, J. (PI); Greenberg, H. (PI); Huang, K. (PI); Idoyaga, J. (PI); Jackson, P. (PI); Kirkegaard, K. (PI); Maecker, H. (PI); Matin, A. (PI); Mocarski, E. (PI); Monack, D. (PI); Nolan, G. (PI); Parham, P. (PI); Pizzo, P. (PI); Prober, C. (PI); Relman, D. (PI); Sarnow, P. (PI); Schneider, D. (PI); Schoolnik, G. (PI); Siegel, R. (PI); Singh, U. (PI); Sonnenburg, J. (PI); Tompkins, L. (PI); Yeh, E. (PI); Choudhry, S. (GP)

MI 802: TGR PhD Dissertation

Terms: Aut, Win, Spr, Sum | Units: 0 | Repeatable for credit
Instructors: ; Amieva, M. (PI); Arvin, A. (PI); Bhatt, A. (PI); Blau, H. (PI); Bogyo, M. (PI); Bollyky, P. (PI); Boothroyd, J. (PI); Boyd, S. (PI); Carette, J. (PI); Chen, C. (PI); Chien, Y. (PI); Chiu, W. (PI); Contag, C. (PI); Davis, M. (PI); Dodd, D. (PI); Egan, E. (PI); Einav, S. (PI); Falkow, S. (PI); Galli, S. (PI); Glenn, J. (PI); Greenberg, H. (PI); Huang, K. (PI); Idoyaga, J. (PI); Jackson, P. (PI); Jagannathan, P. (PI); Kirkegaard, K. (PI); Maecker, H. (PI); Matin, A. (PI); Mocarski, E. (PI); Monack, D. (PI); Mordecai, E. (PI); Nolan, G. (PI); Parham, P. (PI); Pizzo, P. (PI); Prober, C. (PI); Relman, D. (PI); Sarnow, P. (PI); Schneider, D. (PI); Schoolnik, G. (PI); Siegel, R. (PI); Singh, U. (PI); Sonnenburg, J. (PI); Tompkins, L. (PI); Wang, T. (PI); Yeh, E. (PI); Choudhry, S. (GP)
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